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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Jonathan Kober | 3rd | Jeff Riemer | 3rd | 3rd |
| First Basemen | Noel Cusack | 17th | Zach Weakley | 9th | 14th |
| Second Basemen | Dusty Ward | 3rd | Tied for 22nd | 21st | |
| Third Basemen | Jeff Mullinax | 22nd | Kyle Nash | Tied for 7th | 14th |
| Shortstops | Adam Bechdel | 14th | Bobby Uribe | 17th | 16th |
| Left Fielders | Tied for 23rd | Steve Nalbach | 12th | 23rd | |
| Center Fielders | Raul Arreola | 18th | Vinny Torres | 18th | 18th |
| Right Fielders | Willie Villegas | 8th | Michael Nava | 1st | 7th |
| Starting Pitchers | James Dobyns | Tied for 14th | 24th | 23rd | |
| Relievers | Shane Edwards | 9th | Shane Edwards | 20th | 14th |
| Closers | Shane Edwards | 20th | Shane Edwards | 11th | 11th |
