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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Nathan Cameron | Tied for 39th | Tied for 1st | Tied for 39th | |
| First Basemen | Leo Montalvo | Tied for 43rd | Tied for 1st | Tied for 43rd | |
| Second Basemen | Steven Curry | 19th | Tied for 1st | 19th | |
| Third Basemen | Joe Deutsch | 12th | Tied for 1st | 12th | |
| Shortstops | Matt Preslar | Tied for 32nd | Tied for 1st | Tied for 32nd | |
| Left Fielders | Pat Lena | Tied for 51st | Tied for 1st | Tied for 51st | |
| Center Fielders | Nick Schultz | 9th | Tied for 1st | 9th | |
| Right Fielders | Andy Cobler | 11th | Tied for 1st | 11th | |
| Starting Pitchers | Danny Heasley | 2nd | Tied for 1st | 2nd | |
| Relievers | Travis Sandoz | 49th | Tied for 1st | 49th | |
| Closers | Nick Lynn | 11th | Tied for 1st | 11th |
