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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Jason Perez | 46th | Tied for 1st | 46th | |
| First Basemen | Jonathan Swander | Tied for 42nd | Tied for 1st | Tied for 42nd | |
| Second Basemen | Nelson Archuleta | 14th | Tied for 1st | 14th | |
| Third Basemen | David MacAdam | 9th | Tied for 1st | 9th | |
| Shortstops | Harry Valle | 31st | Tied for 1st | 31st | |
| Left Fielders | Kevin McDowell | 20th | Tied for 1st | 20th | |
| Center Fielders | Bill Chavez | 45th | Tied for 1st | 45th | |
| Right Fielders | B.J. Linderman | Tied for 34th | Tied for 1st | Tied for 34th | |
| Starting Pitchers | Jonathan Sites | 45th | Tied for 1st | 45th | |
| Relievers | Brian Dail | 6th | Tied for 1st | 6th | |
| Closers | Chris Bramley | 8th | Tied for 1st | 8th |
