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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Jason Perez | Tied for 40th | Tied for 1st | Tied for 40th | |
| First Basemen | Jonathan Swander | 43rd | Tied for 1st | 43rd | |
| Second Basemen | Nelson Archuleta | 12th | Tied for 1st | 12th | |
| Third Basemen | David MacAdam | 12th | Tied for 1st | 12th | |
| Shortstops | Harry Valle | 29th | Tied for 1st | 29th | |
| Left Fielders | Kevin McDowell | 24th | Tied for 1st | 24th | |
| Center Fielders | Bill Chavez | 42nd | Tied for 1st | 42nd | |
| Right Fielders | B.J. Linderman | 32nd | Tied for 1st | 32nd | |
| Starting Pitchers | Jonathan Sites | 28th | Tied for 1st | 28th | |
| Relievers | Brian Dail | 5th | Tied for 1st | 5th | |
| Closers | Chris Bramley | 9th | Tied for 1st | 9th |
