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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Ryan Mallory | 13th | Tied for 21st | 22nd | |
| First Basemen | Tom Lusardi | 21st | Billy Warren | 9th | 15th |
| Second Basemen | Alex Cruz | 2nd | Chris Alexander | 12th | 3rd |
| Third Basemen | Bobby Tapia | 17th | Tied for 19th | 23rd | |
| Shortstops | Guillermo Ramos | 21st | Tied for 19th | 24th | |
| Left Fielders | Chris Service | 20th | Jesse Reimann | Tied for 11th | 19th |
| Center Fielders | Chris Guardiola | 10th | Ray Alleyne | 17th | 18th |
| Right Fielders | Jason Bloom | 23rd | Tied for 21st | 24th | |
| Starting Pitchers | John Froerer | 23rd | Ferhat Chiwocha | 16th | 18th |
| Relievers | Mike Kelley | 6th | Jim Boonen | 2nd | 3rd |
| Closers | Mike Kelley | 17th | Brian Joiner | 15th | 16th |
