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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Ben Everly | 2nd | Ben Everly | 1st | 2nd |
| First Basemen | Juan Ortiz | 2nd | George Kinder | 4th | 2nd |
| Second Basemen | Dusty Anderson | 8th | Eddie Duran | 7th | 6th |
| Third Basemen | Ryan Forsythe | 7th | Jason Lewis | Tied for 7th | 5th |
| Shortstops | Chris Franklin | 19th | Jose Valdez | 2nd | 3rd |
| Left Fielders | Tim Hutchison | 15th | Joe Bacon | 1st | 10th |
| Center Fielders | Nick Wisniewski | 8th | John Hall | 1st | 6th |
| Right Fielders | Nelson Ziersch | 1st | Nick Cordova | 3rd | 1st |
| Starting Pitchers | Andy Weatherholt | 3rd | Jaheim Johnson | 3rd | 3rd |
| Relievers | Jon Reynolds | 2nd | Jeremy Ferraro | 6th | 2nd |
| Closers | Jon Reynolds | 9th | Eddie O'Connor | 7th | 6th |
