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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Lance Morain | 49th | Tied for 1st | 49th | |
| First Basemen | Jesus Belcher | Tied for 6th | Tied for 1st | Tied for 6th | |
| Second Basemen | Byron Druse | 35th | Tied for 1st | 35th | |
| Third Basemen | Trent Lohrke | 48th | Tied for 1st | 48th | |
| Shortstops | Willie Capilla | 19th | Tied for 1st | 19th | |
| Left Fielders | Justin Dunn | 31st | Tied for 1st | 31st | |
| Center Fielders | Steve Anderson | 36th | Tied for 1st | 36th | |
| Right Fielders | Chris Flores | 47th | Tied for 1st | 47th | |
| Starting Pitchers | David Robertson | 35th | Tied for 1st | 35th | |
| Relievers | Jeff Keith | 40th | Tied for 1st | 40th | |
| Closers | Nick Lien | 46th | Tied for 1st | 46th |
