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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Ivan Rodriguez | 20th | Tied for 1st | 20th | |
| First Basemen | Danny McKibben | 27th | Tied for 1st | 27th | |
| Second Basemen | Jesus Ferrer | 49th | Tied for 1st | 49th | |
| Third Basemen | Bryan Bautista | 55th | Tied for 1st | 55th | |
| Shortstops | Trevor Cunningham | 7th | Tied for 1st | 7th | |
| Left Fielders | Pat Mohn | 41st | Tied for 1st | 41st | |
| Center Fielders | David Schulz | 2nd | Tied for 1st | 2nd | |
| Right Fielders | Chris Hartlaub | 38th | Tied for 1st | 38th | |
| Starting Pitchers | Jaheim Johnson | 5th | Tied for 1st | 5th | |
| Relievers | Nate Jones | 40th | Tied for 1st | 40th | |
| Closers | Felix Flores | 6th | Tied for 1st | 6th |
