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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Dustin Downing | 14th | Zach Troyer | 8th | 9th |
| First Basemen | Ross Dorough | 19th | Luke Flynn | Tied for 17th | 20th |
| Second Basemen | Brent Hansen | 21st | Adam Wright | 18th | 23rd |
| Third Basemen | Rocky Hawke | 21st | Chris Gutierre | Tied for 3rd | 9th |
| Shortstops | Jay Pearson | 2nd | Carlos Crespo | 14th | 11th |
| Left Fielders | Joe Robinson | 2nd | David Torres | 14th | 2nd |
| Center Fielders | Jon Wagner | 16th | Tied for 20th | 19th | |
| Right Fielders | Glen Helms | 20th | Steve Nebeker | 1st | 10th |
| Starting Pitchers | Jonathan Allen | 11th | Bobby Henderson | 21st | 21st |
| Relievers | Mike Braasch | 8th | Stuart Hamlin | 24th | 20th |
| Closers | Mike Braasch | 2nd | Marcos Guadarrama | 21st | 17th |
