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| Position | Top player | Team ranking | Top prospect | Organizational ranking | Overall ranking |
|---|---|---|---|---|---|
| Catchers | Craig Murphy | 19th | Zach Troyer | 12th | 12th |
| First Basemen | Dustin Harter | 22nd | Mike Daniels | 8th | 18th |
| Second Basemen | Josh Kreisle | 15th | 21st | 23rd | |
| Third Basemen | Tied for 23rd | Arturo Farias | 10th | 23rd | |
| Shortstops | Jay Pearson | 9th | Tied for 13th | 17th | |
| Left Fielders | Chris Beasley | 14th | Brian Phillips | 8th | 12th |
| Center Fielders | Jay Thibodeaux | 17th | Tied for 19th | 20th | |
| Right Fielders | Carlos Rodriguez | 16th | David Torres | Tied for 7th | 9th |
| Starting Pitchers | Brandon Jones | 15th | Pat DeChant | 21st | 20th |
| Relievers | Mike Braasch | 5th | Stuart Hamlin | 21st | 15th |
| Closers | Mike Braasch | 1st | Stuart Hamlin | Tied for 13th | 2nd |
